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COMSTAT 1 COMSTAT 1 is a program for quantification of three-dimensional biofilm structures. It analyzes stacks of images acquired with confocal laser scanning microscopy (SCLM). It is written as a script in MATLAB 5.3 (MathWorks, http://www.mathworks.com/), equipped with the Image Processing Toolbox. The program is menu controlled, user-friendly, and requires no prior knowledge in programming or image analysis. MATLAB 5.3 equipped with the Image Processing Toolbox must be available on your computer. Later versions of MATLAB will also work fine. COMSTAT 1 has been described in two papers: Heydorn, A., Nielsen, A.T., Hentzer, M., Sternberg, C., Givskov, M., Ersbøll, B.K., Molin, S. (2000) Quantification of biofilm structures by the novel computer program COMSTAT. Microbiology 146(10), 2395-407.
Heydorn, A., Nielsen, A.T., Hentzer, M., Sternberg, C., Givskov, M., Ersbøll, B.K., Molin, S. (2000) Quantification of biofilm structures by the novel computer program COMSTAT. Microbiology 146(10), 2395-407. |
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